Feng, X., D.S. Park, R. Pandey, and M. Papeş. Collinearity in ecological niche modeling: confusions and challenges. Ecology and Evolution, in press.

Feng, X., D.S. Park, C. Walker, A.T. Peterson, C. Merow, and M. Papeş. A checklist for maximizing reproducibility of ecological niche models. Nature Ecology and Evolution, in press.

Gherghel, I., F. Brischoux, and M. Papeş. Refining model estimates of potential species’ distribution to relevant accessible areas. Progress in Physical Geography, in press.

Carrasco Tornero, L., X. Giam, M. Papeş, and K. Sheldon. 2019. Metrics of lidar-derived 3D vegetation structure reveal contrasting effects of horizontal and vertical forest heterogeneity on bird species richness. Remote Sensing 11(7):743.

Gebresenbet, F., H. Bauer, J.M. Vadijunec, M. Papeş. 2018. Beyond the numbers: human attitudes and conflict with lions (Panthera leo) in and around Gambella National Park, Ethiopia. PLoS One 13(9):e0204320.

Gherghel, I., F. Brischoux, and M. Papeş. 2018. Using biotic interactions in broad-scale estimates of species’ distributions. Journal of Biogeography 45:2216-2225.

Herrin, B.H., M.J. Beall, X. Feng, M. Papeş, and S. Little. 2018. Canine and human infection with Borrelia burgdorferi in the New York City metropolitan area. Parasites and Vectors 11: 187.

Liang, W., M. Papeş, L.Tran. J. Grant, R. Washington-Allen, S. Stewart, and G. Wiggins. 2018. The effect of pseudo-absence selection method on transferability of species distribution models in the context of non-adaptive niche shift. Ecological Modelling 388: 1-9.

Pandey, R. and M. Papeș. 2018. Changes in future potential distributions of apex predator and mesopredator mammals in North America. Regional Environmental Change 18:1223–1233.

Qiao, H., X. Feng, L.E. Escobar, A.T. Peterson, J. Soberón, G. Zhu, M. Papeş. 2018. An evaluation of transferability of ecological niche models. Ecography 41: 1-14.

Fountain-Jones, N.M, W.D. Pearse, L.E. Escobar, A. Alba-Casals, S. Carver, T.J. Davies, S. Kraberger, M. Papeș, K. Vandegrift, K. Worsley-Tonks, and M.E. Craft. 2017. Towards an eco-phylogenetic framework for infectious disease ecology. Biological Reviews 93:950-970.

Feng, X and M. Papeş. 2017. Can incomplete knowledge of species’ physiology facilitate ecological niche modelling? A case study with virtual species. Diversity and Distributions 23:1157-1168.

Feng, X and M. Papeş. 2017. Physiological limits in an ecological niche modeling framework: a case study of water temperature and salinity constraints of freshwater bivalves invasive in USA. Ecological Modelling 346:48–57.

Feng, X., T.C.S. Anacleto, and M. Papeş. 2017. Climatic similarity of extant and extinct Dasypus armadillos. Journal of Mammalian Evolution 24:193–206.

Feng, X., M.C. Castro, E. Linde, and M. Papeş. 2017. Armadillo Mapper: A case study of an online application to update estimates of species’ potential distributions. Tropical Conservation Science 10:1-5.

Feng, X., M.C. Castro, K. McBee, and M. Papeş. 2017. Hiding in a cool climatic niche in the Tropics? An assessment of the ecological biogeography of hairy long-nosed armadillos (Dasypus pilosus). Tropical Conservation Science 10:1-13.

Jog, S.K, J.T. Bried, X. Feng, A.R. Dzialowski, M. Papeş, and C.A. Davis. 2017. Can land use indicate wetland floristic quality and taxonomic distinctness? Ecological Indicators 78:331-339.

Tanner E.P., M. Papeş, R.D. Elmore, S.D. Fuhlendorf, and C.A. Davis. 2017. Incorporating abundance information and guiding variable selection for climate-based ensemble forecasting of species’ distributional shifts. PLoS One 12: e0184316.

Thompson, D., D.B. Ligon, J.C. Patton, and M. Papeş. 2017. Effects of life-history requirements on the distribution of a threatened reptile. Conservation Biology 31:427-436.

Taylor A.T., M. Papeș, J.M. Long. 2017. Incorporating fragmentation and non-native species into distribution models to inform fluvial fish conservation. Conservation Biology 32:171-182.

Dvorett, D., C. Davis, and M. Papeş. 2016. Mapping and hydrologic attribution of temporary wetlands using recurrent Landsat imagery. Wetlands 36:431-443.

Gherghel, I., M. Papeş, F. Brischoux, T. Sahlean, and A. Strugariu. 2016. A revision of the distribution of sea kraits (Reptilia, Laticauda) with an updated occurrence dataset for ecological and conservation research. ZooKeys 569:135-148.

Gherghel, I., A. Sotek, M. Papeş, L. Fusu, and A. Strugariu. 2016. Ecology and biogeography of the endemic scorpion species Euscorpius carpathicus (Scorpiones: Euscorpiidae): a multiscale analysis. Journal of Arachnology 44:88-91.

Harkins, C., R. Shannon, M. Papeş, A. Schmidt-Rhaesa, B. Hanelt, and M.G. Bolek. 2016. Using gordiid cysts to discover the hidden diversity, potential distribution, and new species of gordiids (Phylum Nematomorpha). Zootaxa 4088:515-530.

Papeş, M., J.E. Havel, and M.J. Vander Zanden. 2016. Using maximum entropy to predict the potential distribution of an invasive freshwater snail. Freshwater Biology 61:457-471.

Siler, C.D., D.R. Davis, E. Freitas, N.A. Huron, A. Geheber, J.W. Watters, M.L. Penrod, M. Papeș, A. Amrein, A. Anwar, D. Cooper, T. Hein, A. Manning, N. Patel, L. Pinaroc, A.C. Diesmos, M.L. Diesmos, and R.M. Brown. 2016. Additions to Philippine Slender Skinks of the Brachymeles bonitae Complex (Reptilia: Squamata: Scincidae) II: a new species from the northern Philippines. Zootaxa, 4132:015-029.

Escobar, L.E., A.T. Peterson, M. Papeş, M. Favi, V. Yung, O. Restif, H. Qiao, and G. Medina-Vogel. 2015. Ecological approaches in veterinary epidemiology: mapping the risk of bat-borne rabies using vegetation indices and night-time light satellite imagery. Veterinary Research 46:92.

Feng, X. and M. Papeş. 2015. Ecological niche modelling confirms potential northeast range expansion of the nine-banded armadillo (Dasypus novemcinctus). Journal of Biogeography 42:803-807.

Gherghel, I and M. Papeş. 2015. Landscape as a determinant of dispersal patterns and population connectivity in a newt species. Ecological Informatics 28:1-6.

Hovick, T.J., D.K. Dahlgren, M. Papeş, R.D. Elmore, and J.C. Pitman. 2015. Predicting Greater Prairie-Chicken lek site suitability to inform conservation actions. PLoS One 10:e0137021.

Loveless, A.M., D. M. Reding, P.M. Kapfer, and M. Papeş. 2015. Combining ecological niche modeling and morphology to assess the range-wide population genetic structure of bobcats (Lynx rufus). Biological Journal of the Linnean Society 117:842-857.

Palacios Gonzáles, M., E. Bonaccorso, and M. Papeş. 2015. Applications of geographic information systems and remote sensing techniques to conservation of amphibians in northwestern Ecuador. Global Ecology and Conservation 3:562-574.

Pandey, R., K.K. Khadka, and Papeş, M. 2015. Geographic and taxonomic biases in conservation research efforts in Nepal. Asian Journal of Conservation Biology 4:89-91.

Papeş, M., F. Cuzin, and P. Gaubert. 2015. Niche dynamics in the European ranges of two African carnivores reflect their dispersal and demographic histories. Biological Journal of the Linnean Society 114:737-751

Peterson, A.T., M. Papeş, and J. Soberón. 2015. Mechanistic and correlative models of ecological niches. European Journal of Ecology 1:28-38.

Harris, A.J., M. Papeş, Y. Gao, and L. Watson. 2014. Estimating paleoenvironments using ecological niche models of nearest living relatives: a case study of Eocene Aesculus L. Journal of Systematics and Evolution 52:16-34.

Iosif, R., M. Papeş, C. Samoila, and D. Cogălniceanu. 2014. Climate-induced shifts in the niche similarity of two related spadefoot toads (genus Pelobates). Organisms Diversity and Evolution 14: 397-408.

Sahlean, T.C., I. Gherghel, M. Papeş, A. Strugariu, and Ş.R. Zamfirescu. 2014. Refining climate change projections for organisms with low dispersal abilities: a case study of the Caspian Whip Snake. PLoS ONE 9: e91994.

Bartrons, M., M. Papeş, M. Diebel, C. Gratton, and M.J. Vander Zanden. 2013. Regional-level inputs of emergent aquatic insects from water to land. Ecosystems 16:1353-1363.

Hansen, G.J.A., M.J. Vander Zanden, M.J. Blum, M.K. Clayton, E.F. Hain, J. Hauxwell, M. Izzo, M.S. Kornis, P.B. McIntyre, A. Mikulyuk, E. Nilsson, J.D. Olden, M. Papeş, and S. Sharma. 2013. Commonly rare and rarely common: comparing population abundance of invasive and native aquatic species. PLoS One 8:e77415.

Morehouse, R.L., M. Papeş, and M. Tobler. 2013.  Predicting and mapping the potential distribution of the painted devil crayfish, Cambarus ludovicianus Faxon (Decapoda: Cambaridae). Southwestern Naturalist 58:435-439.

Mueller, E.K., K.A. Baum, M. Papeş, L.A. Cohn, A.K. Cowell, and M.V. Reichard. 2013. Potential ecological distribution of Cytauxzoon felis in domestic cats in Oklahoma, Missouri, and Arkansas. Veterinary Parasitology 192:104-110.

Papeş, M., R. Tupayachi, P. Martínez, A.T. Peterson, G.P. Asner, and G.V.N. Powell. 2013. Seasonal variation in spectral signatures of five genera of rainforest trees. IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing (JSTARS) 6:339-350.

Sohn, N., M.H. Fernandez, M. Papeş, and M. Anciães. 2013. Ecological niche modeling in practice: flagship species and regional conservation planning. Oecologia Australis 17:429-440.

Lee, D.N., M. Papeş, and R.A. Van Den Bussche. 2012. Present and potential future distribution of common vampire bats in the Americas and the associated risk to cattle. PLoS One 7:e42466.

Papeş, M., A.T. Peterson, and G.V.N. Powell. 2012. Vegetation dynamics and avian seasonal migration: clues from remotely sensed vegetation indices and ecological niche modelling. Journal of Biogeography 39:652-664.

Jiménez-Valverde, A.  N. Barve, A. Lira-Noriega, S. Maher, Y. Nakazawa, M. Papeş, J. Soberón, J. Sukumaran, and A.T. Peterson. 2011. Dominant climate influences on North American bird distributions. Global Ecology and Biogeography 20:114-118.

Papeş, M., M. Sällström, T.R. Asplund, and M.J. Vander Zanden. 2011. Invasive species research to meet the needs of resource management and planning. Conservation Biology 25:867-872.

Saupe, E.E., M. Papeş, P.A. Selden, and R.S. Vetter. 2011. Tracking a medically important spider: climate change, ecological niche modeling, and the brown recluse (Loxosceles reclusa). PLoS One 6:e17731.

Papes, M. 2010. Bird Conservation and Agriculture [book review]. The Quarterly Review of Biology 85:237.

Papeş, M., R. Tupayachi, P. Martínez, A.T. Peterson, and G.V.N. Powell. 2010. Using hyperspectral satellite imagery for regional inventories: a test with tropical emergent trees in the Amazon Basin. Journal of Vegetation Science 21:342-354.

Robbins, M.B., A. Nyári, M. Papeş, and B.W. Benz. 2010. River-based surveys for assessing riparian bird populations: Cerulean Warbler as a test case. Southeastern Naturalist 9:95-104.

Peterson, A.T, M.J. Andersen, S. Bodbyl-Roels, P. Hosner, A. Nyári, C. Oliveros, and M. Papeş. 2009. A prototype forecasting system for bird-borne disease spread in North America based on migratory bird movements. Epidemics 1:240-249.

Robbins, M.B., A. Nyári, M. Papeş, B.W. Benz, and B. Barber. 2009. Song rates, mating status, and territory size of Cerulean warblers in Missouri Ozark riparian forest. Wilson Journal of Ornithology 12:283-289.

Peterson, A.T., M. Papeş, and J. Soberón. 2008. Rethinking receiver operating characteristic analysis applications in ecological niche modeling. Ecological Modelling 213:63-72.

Papeş, M. 2007. Ecological niche modeling approaches to conservation of endangered and threatened birds in central and eastern Europe. Biodiversity Informatics 4:14-26.

Papeş M. and P.Gaubert. 2007. Modelling ecological niches from low numbers of occurrences: assessment of the conservation status of poorly known viverrids (Mammalia, Carnivora) across two continents. Diversity and Distributions 13:890-902.

Peterson, A.T., M. Papeş and M. Eaton. 2007. Transferability and model evaluation in ecological niche modeling: a comparison of GARP and Maxent. Ecography 30:550-560.

Peterson, A.T, M. Papeş, D.S. Carroll, H. Leirs, and K.M. Johnson. 2007. Mammal taxa constituting potential coevolved reservoirs of filoviruses. Journal of Mammalogy 88:1544-1554.

Peterson, A.T., B.W. Benz, and M. Papeş. 2007. Highly pathogenic H5N1 avian influenza: entry pathways into North America via bird migration. PLoS One 2:e261.

York, H and M. Papeş. 2007. Limiting similarity and species assemblages in the short-tailed fruit bats (Chiroptera: Phyllostomidae: Carollia). Journal of Zoology 273:249-256.

Gaubert, P., M. Papeş, and A.T. Peterson. 2006. Natural history collections and the conservation of poorly known taxa: ecological niche modeling in Central African rainforest genets (Genetta spp.). Biological Conservation 130:106-117.

Mohamed, K.I., M. Papeş, R. Williams, B.W. Benz, and A.T. Peterson. 2006. Global invasive potential of 10 parasitic witchweeds and related Orobanchaceae. AMBIO 35:281-288.

Peterson, A.T. and M. Papeş. 2006. Potential geographic distribution of the Bugun Liocichla (Liocichla bugunorum), a poorly-known species from northeastern India. Indian Birds 2:146-149.

Peterson, A.T., M. Papeş, M.G. Reynolds, N.D. Perry, B. Hanson, R.L. Regnery, C.L. Hutson, I.K. Damon, and D.S. Carroll. 2006. Native-range ecology and invasive potential of Cricetomys in North America. Journal of Mammalogy 87:427-432.

Papeş, M. and A.T. Peterson. 2003. Predicting the potential invasive distribution for Eupatorium adenophorum Spreng. in China. Journal of Wuhan Botanical Research 21: 137-142.

Peterson, A.T., M. Papeş, and D. Kluza. 2003. Predicting the potential invasive distributions of four alien plant species in North America. Weed Science 51:863-868.